Sequence Similarity Clusters for the Entities in PDB 2CCI

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 358 365 23
95 % 373 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 373 380 38
70 % 373 380 44
50 % 396 405 68
40 % 438 462 49
30 % 3715 3966 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 83 86 169
95 % 102 105 155 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 106 109 160
70 % 106 109 176
50 % 106 109 219
40 % 106 109 238
30 % 111 115 242
Entity #3 | Chains: F,I
CELL DIVISION CONTROL PROTEIN 6 HOMOLOG protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50355
95 % 1 1 37635
90 % 1 1 35914
70 % 1 1 31929
50 % 1 1 27302
40 % 1 1 24139
30 % 1 1 20536

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures