Sequence Similarity Clusters for the Entities in PDB 2CCI

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 360 367 23
95 % 376 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 376 383 38
70 % 376 383 44
50 % 399 408 73
40 % 441 465 50
30 % 3822 4076 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 83 86 170
95 % 102 105 155 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 106 109 161
70 % 106 109 178
50 % 106 109 219
40 % 106 109 237
30 % 111 115 243
Entity #3 | Chains: F,I
CELL DIVISION CONTROL PROTEIN 6 HOMOLOG protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50992
95 % 1 1 38103
90 % 1 1 36350
70 % 1 1 32305
50 % 1 1 27607
40 % 1 1 24414
30 % 1 1 20767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures