Sequence Similarity Clusters for the Entities in PDB 2CCI

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 357 364 21
95 % 372 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 372 379 36
70 % 372 379 43
50 % 395 404 65
40 % 436 460 48
30 % 3631 3879 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 83 86 163
95 % 102 105 149 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 106 109 156
70 % 106 109 173
50 % 106 109 214
40 % 106 109 235
30 % 111 115 233
Entity #3 | Chains: F,I
CELL DIVISION CONTROL PROTEIN 6 HOMOLOG protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49310
95 % 1 1 36893
90 % 1 1 35239
70 % 1 1 31363
50 % 1 1 26845
40 % 1 1 23742
30 % 1 1 20214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.