Sequence Similarity Clusters for the Entities in PDB 2CCH

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 364 21
95 % 23 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 23 379 36
70 % 23 379 43
50 % 23 404 65
40 % 24 460 49
30 % 235 3886 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 86 167
95 % 1 105 151 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 109 158
70 % 1 109 174
50 % 1 109 215
40 % 1 109 235
30 % 1 115 233
Entity #3 | Chains: E,F
CELL DIVISION CONTROL PROTEIN 6 HOMOLOG protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.