Sequence Similarity Clusters for the Entities in PDB 2C9W

Entity #1 | Chains: A
SUPPRESSOR OF CYTOKINE SIGNALING 2 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 8979
95 % 1 3 9150 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.9
PDBFlex
90 % 1 3 9052
70 % 1 3 8642
50 % 1 3 7823
40 % 1 3 7181
30 % 1 3 6333
Entity #2 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 896
95 % 3 20 1144 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 3 20 1172
70 % 3 20 1213
50 % 3 20 1259
40 % 3 20 1275
30 % 3 20 1251
Entity #3 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 39 217
95 % 3 40 295 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 3 40 310
70 % 3 40 351
50 % 3 40 414
40 % 3 40 446
30 % 3 41 442

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.