Sequence Similarity Clusters for the Entities in PDB 2C9W

Entity #1 | Chains: A
SUPPRESSOR OF CYTOKINE SIGNALING 2 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9127
95 % 1 3 9301 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.9
PDBFlex
90 % 1 3 9204
70 % 1 3 8781
50 % 1 3 7943
40 % 1 3 7293
30 % 1 3 6437
Entity #2 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 909
95 % 3 20 1160 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 20 1186
70 % 3 20 1225
50 % 3 20 1279
40 % 3 20 1293
30 % 3 20 1269
Entity #3 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 39 218
95 % 3 40 303 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 3 40 318
70 % 3 40 361
50 % 3 40 428
40 % 3 40 454
30 % 3 41 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.