Sequence Similarity Clusters for the Entities in PDB 2C9W

Entity #1 | Chains: A
SUPPRESSOR OF CYTOKINE SIGNALING 2 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9241
95 % 1 3 9430 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 1 3 9328
70 % 1 3 8930
50 % 1 3 8068
40 % 1 3 7401
30 % 1 3 6534
Entity #2 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 919
95 % 3 20 1176 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 20 1203
70 % 3 20 1239
50 % 3 20 1293
40 % 3 20 1307
30 % 3 20 1283
Entity #3 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 47 172
95 % 3 48 231 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 3 48 246
70 % 3 48 278
50 % 3 48 312
40 % 3 48 330
30 % 3 49 336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.