Sequence Similarity Clusters for the Entities in PDB 2C39

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 709
95 % 10 10 914 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 10 10 946
70 % 10 10 977
50 % 10 10 1022
40 % 19 19 776
30 % 19 20 752
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 741
95 % 10 10 915 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 10 10 947
70 % 10 10 978
50 % 19 19 740
40 % 19 20 758
30 % 37 42 483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.