Sequence Similarity Clusters for the Entities in PDB 2C38

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 675
95 % 9 10 877 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 9 10 909
70 % 9 10 940
50 % 9 10 988
40 % 18 19 733
30 % 18 20 712
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 709
95 % 9 10 878 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 9 10 910
70 % 9 10 941
50 % 18 19 695
40 % 18 20 719
30 % 33 40 486

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.