Sequence Similarity Clusters for the Entities in PDB 2C1M

Entity #1 | Chains: A
IMPORTIN-ALPHA2 SUBUNIT protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 44 64 542
95 % 44 64 738 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 50 72 632
70 % 50 72 677
50 % 59 95 440
40 % 61 99 459
30 % 61 99 458
Entity #2 | Chains: B
NUCLEOPORIN 50 KDA protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72931
95 % 1 1 50742
90 % 1 1 48176
70 % 1 1 42301
50 % 1 1 36089
40 % 1 1 31777
30 % 1 1 26873

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.