Sequence Similarity Clusters for the Entities in PDB 2C1M

Entity #1 | Chains: A
IMPORTIN-ALPHA2 SUBUNIT protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 44 63 544
95 % 44 63 750 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 50 71 634
70 % 50 71 672
50 % 59 93 465
40 % 61 96 489
30 % 61 96 491
Entity #2 | Chains: B
NUCLEOPORIN 50 KDA protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71774
95 % 1 1 49872
90 % 1 1 47362
70 % 1 1 41707
50 % 1 1 35670
40 % 1 1 31424
30 % 1 1 26573

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.