Sequence Similarity Clusters for the Entities in PDB 2BYP

Entity #1 | Chains: A,B,C,D,E
SOLUBLE ACETYLCHOLINE RECEPTOR protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 28 122
95 % 14 62 40 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.8
PDBFlex
90 % 14 64 40
70 % 14 65 48
50 % 14 65 87
40 % 14 65 109
30 % 23 130 25
Entity #2 | Chains: F,G,H,I,J
ALPHA-CONOTOXIN IMI protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.