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Complex of the neisserial PorA P1.4 epitope peptide and two Fab- fragments (antibody MN20B9.34)
Sequence Clustering and Redundancy Reduction Results
2BRR
Sequence Clusters for the Sequence Entities in PDB 2BRR
Entity #1: Chains: H,Y - MN20B9.34 ANTI-P1.4 ANTIBODY, FAB HEAVY CHAIN protein, length: 225 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 32353
95% 1 1 24924
90% 2 12 3830
70% 338 1672 1
50% 694 3457 1
40% 694 3458 1
30% 755 4083 1
Entity #2: Chains: L,X - MN20B9.34 ANTI-P1.4 ANTIBODY, FAB LIGHT CHAIN protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 33065
95% 1 20 2197
90% 10 132 124
70% 281 1445 3
50% 695 3457 1
40% 695 3458 1
30% 756 4083 1
Entity #3: Chains: P - CLASS 1 OUTER MEMBRANE PROTEIN VARIABLE REGION 2 protein, length: 13 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.