Sequence Similarity Clusters for the Entities in PDB 2BR8

Entity #1 | Chains: A,B,C,D,E
SOLUBLE ACETYLCHOLINE RECEPTOR protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 20 208
95 % 37 62 40 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.8
PDBFlex
90 % 38 64 40
70 % 39 65 48
50 % 39 65 87
40 % 39 65 109
30 % 70 132 26
Entity #2 | Chains: F,G,H,I,J
ALPHA-CONOTOXIN PNIA protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.