Sequence Similarity Clusters for the Entities in PDB 2BKI

Entity #1 | Chains: A
UNCONVENTIONAL MYOSIN protein, length: 858 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 2123
95 % 19 21 1621 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.4
PDBFlex
90 % 19 21 1653
70 % 19 21 1671
50 % 19 21 1706
40 % 19 21 1724
30 % 80 133 220
Entity #2 | Chains: B,D
CALMODULIN protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 93 141 101
95 % 113 178 90 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 126 191 87
70 % 127 193 103
50 % 143 226 112
40 % 187 349 43
30 % 207 376 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures