Sequence Similarity Clusters for the Entities in PDB 2BKI

Entity #1 | Chains: A
UNCONVENTIONAL MYOSIN protein, length: 858 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 2137
95 % 20 22 1654 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.1
PDBFlex
90 % 20 22 1686
70 % 20 22 1690
50 % 20 22 1726
40 % 20 22 1714
30 % 82 135 234
Entity #2 | Chains: B,D
CALMODULIN protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 118 186 60
95 % 121 190 80 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 134 203 77
70 % 135 205 93
50 % 151 238 105
40 % 195 361 40
30 % 248 432 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures