Sequence Similarity Clusters for the Entities in PDB 2BKI

Entity #1 | Chains: A
UNCONVENTIONAL MYOSIN protein, length: 858 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 2153
95 % 19 21 1640 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.4
PDBFlex
90 % 19 21 1671
70 % 19 21 1697
50 % 19 21 1734
40 % 19 21 1749
30 % 81 134 221
Entity #2 | Chains: B,D
CALMODULIN protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 149 96
95 % 121 187 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 134 200 81
70 % 135 202 96
50 % 151 235 105
40 % 195 358 41
30 % 215 385 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures