Sequence Similarity Clusters for the Entities in PDB 2BFU

Entity #1 | Chains: L
COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 10313
95 % 3 7 10344 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 3 7 10217
70 % 3 7 9704
50 % 5 10 6200
40 % 5 10 5789
30 % 5 10 5199
Entity #2 | Chains: S
COWPEA MOSAIC VIRUS, SMALL (S) SUBUNIT protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 22185
95 % 2 4 19169 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 2 4 18672
70 % 2 4 17264
50 % 2 4 14986
40 % 2 4 13341
30 % 2 4 11427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures