Sequence Similarity Clusters for the Entities in PDB 2BF1

Entity #1 | Chains: A
EXTERIOR MEMBRANE GLYCOPROTEIN GP120 protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34684
95 % 2 2 27329 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 26414
70 % 2 2 23957
50 % 2 2 20620
40 % 2 2 18217
30 % 127 129 245

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.