Sequence Similarity Clusters for the Entities in PDB 2BDE

Entity #1 | Chains: A
cytosolic IMP-GMP specific 5'-nucleotidase protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14290
95 % 3 3 13414 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 3 3 13186
70 % 3 3 12379
50 % 3 3 11021
40 % 3 3 9919
30 % 40 41 1163

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4OHF 1 A, B, C, D Cytosolic IMP-GMP specific 5'-nucleotidase 446
2 4G63 1 A Cytosolic IMP-GMP specific 5'-nucleotidase 446
3 2BDE 1 A cytosolic IMP-GMP specific 5'-nucleotidase 446