Sequence Similarity Clusters for the Entities in PDB 2BDE

Entity #1 | Chains: A
cytosolic IMP-GMP specific 5'-nucleotidase protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14887
95 % 3 3 13998 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 3 3 13729
70 % 3 3 12852
50 % 3 3 11411
40 % 3 3 10270
30 % 40 41 1213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4OHF 1 A, B, C, D Cytosolic IMP-GMP specific 5'-nucleotidase 446
2 4G63 1 A Cytosolic IMP-GMP specific 5'-nucleotidase 446
3 2BDE 1 A cytosolic IMP-GMP specific 5'-nucleotidase 446