Sequence Similarity Clusters for the Entities in PDB 2BDE

Entity #1 | Chains: A
cytosolic IMP-GMP specific 5'-nucleotidase protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15089
95 % 3 3 14190 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 3 3 13917
70 % 3 3 13020
50 % 3 3 11543
40 % 3 3 10383
30 % 44 45 1133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4OHF 1 A, B, C, D Cytosolic IMP-GMP specific 5'-nucleotidase 446
2 4G63 1 A Cytosolic IMP-GMP specific 5'-nucleotidase 446
3 2BDE 1 A cytosolic IMP-GMP specific 5'-nucleotidase 446