Sequence Similarity Clusters for the Entities in PDB 2BDE

Entity #1 | Chains: A
cytosolic IMP-GMP specific 5'-nucleotidase protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14201
95 % 3 3 13342 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 3 3 13114
70 % 3 3 12306
50 % 3 3 10960
40 % 3 3 9866
30 % 8 8 4996

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures