Sequence Similarity Clusters for the Entities in PDB 2BCJ

Entity #1 | Chains: A
G-protein-coupled receptor kinase 2 protein, length: 689 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3736
95 % 17 21 2363 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 17 21 2425
70 % 17 21 2410
50 % 17 21 2405
40 % 17 21 2386
30 % 17 21 2282
Entity #2 | Chains: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 30 1168
95 % 27 35 1345 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 27 35 1371
70 % 27 35 1388
50 % 28 36 1364
40 % 28 38 1314
30 % 28 38 1293
Entity #3 | Chains: G
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 25 1725
95 % 17 25 2271 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.2
PDBFlex
90 % 17 25 2336
70 % 17 25 2331
50 % 17 25 2311
40 % 17 25 2299
30 % 17 25 2196
Entity #4 | Chains: Q
Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(q) subunit alpha chimera protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 18414
95 % 6 11 3938 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.0
PDBFlex
90 % 6 11 3976
70 % 6 11 3935
50 % 64 77 418
40 % 79 97 355
30 % 81 99 345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.