Sequence Similarity Clusters for the Entities in PDB 2B5J

Entity #1 | Chains: A
Reverse transcriptase P66 SUBUNIT protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 26 1140
95 % 189 238 104
90 % 189 238 109
70 % 189 238 124
50 % 190 239 152
40 % 190 239 170
30 % 190 239 184
Entity #2 | Chains: B
Reverse transcriptase P51 SUBUNIT protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 95 213
95 % 184 232 115 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.6
PDBFlex
90 % 184 232 118
70 % 184 232 135
50 % 185 233 161
40 % 185 233 178
30 % 185 233 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.