Sequence Similarity Clusters for the Entities in PDB 2B5J

Entity #1 | Chains: A
Reverse transcriptase P66 SUBUNIT protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 77 107 264
95 % 227 277 92 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 227 277 97
70 % 227 277 112
50 % 228 278 147
40 % 229 279 158
30 % 229 279 178
Entity #2 | Chains: B
Reverse transcriptase P51 SUBUNIT protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 98 130 207
95 % 222 271 112 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 222 271 117
70 % 222 271 131
50 % 224 273 157
40 % 224 273 170
30 % 224 273 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures