Sequence Similarity Clusters for the Entities in PDB 2B4C

Entity #1 | Chains: G
envelope glycoprotein protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46471
95 % 1 1 33678
90 % 2 2 22770
70 % 28 31 1010
50 % 28 31 1058
40 % 28 31 1081
30 % 102 111 242
Entity #2 | Chains: C
T-cell surface glycoprotein CD4 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 34 680
95 % 33 39 757
90 % 33 39 796
70 % 33 39 843
50 % 33 39 908
40 % 33 39 931
30 % 33 39 925
Entity #3 | Chains: L
anti-HIV-1 gp120 immunoglobulin X5 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23383
95 % 2 2 19613
90 % 438 461 4
70 % 1464 1519 3
50 % 3541 3677 1
40 % 3542 3678 1
30 % 4191 4338 1
Entity #4 | Chains: H
anti-HIV-1 gp120 immunoglobulin X5 heavy chain protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23011
95 % 2 2 19331
90 % 2 2 18785
70 % 1719 1782 1
50 % 3542 3677 1
40 % 3543 3678 1
30 % 4192 4338 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.