Sequence Similarity Clusters for the Entities in PDB 2AKR

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d1 protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 52 383
95 % 11 58 498
90 % 11 58 525
70 % 11 73 392
50 % 13 88 337
40 % 13 88 367
30 % 185 752 13
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 74 234
95 % 22 208 57
90 % 22 208 61
70 % 201 780 5
50 % 204 798 5
40 % 204 798 9
30 % 204 798 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.