Sequence Similarity Clusters for the Entities in PDB 2AKR

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d1 protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 52 399
95 % 11 58 509
90 % 11 58 536
70 % 11 73 406
50 % 13 88 349
40 % 13 88 378
30 % 194 775 13
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 234
95 % 22 210 60
90 % 22 210 63
70 % 213 806 5
50 % 216 824 5
40 % 216 824 9
30 % 216 824 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.