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An Information Portal to 105339 Biological Macromolecular Structures

Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Sequence Clustering and Redundancy Reduction Results
2AKA
Sequence Clusters for the Sequence Entities in PDB 2AKA
Entity #1: Chains: A - myosin II heavy chain protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 10 4286
95% 3 42 902
90% 3 42 925
70% 3 42 964
50% 3 42 1013
40% 3 90 229
30% 4 108 201
Entity #2: Chains: L - LINKER protein, length: 13 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: B - Dynamin-1 protein, length: 299 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 43372
95% 1 1 31203
90% 1 1 29992
70% 1 2 10027
50% 1 4 6801
40% 1 5 5483
30% 1 5 4911
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.