Sequence Similarity Clusters for the Entities in PDB 2AKA

Entity #1 | Chains: A
myosin II heavy chain protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 5336
95 % 3 43 1092
90 % 3 43 1114
70 % 3 43 1158
50 % 3 43 1203
40 % 4 100 261
30 % 6 125 216
Entity #2 | Chains: L
LINKER protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
Dynamin-1 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51657
95 % 1 1 36910
90 % 1 1 35347
70 % 1 2 11910
50 % 1 4 8048
40 % 1 5 6500
30 % 1 5 5766

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.