Sequence Similarity Clusters for the Entities in PDB 2AKA

Entity #1 | Chains: A
myosin II heavy chain protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 5835
95 % 3 41 1255
90 % 3 41 1285
70 % 3 41 1309
50 % 3 41 1351
40 % 4 101 281
30 % 6 126 237
Entity #2 | Chains: L
LINKER protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
Dynamin-1 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55498
95 % 1 1 39705
90 % 1 1 37945
70 % 1 2 12845
50 % 1 2 11432
40 % 1 3 8909
30 % 1 3 7801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.