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An Information Portal to 111558 Biological Macromolecular Structures

Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Sequence Clustering and Redundancy Reduction Results
2AKA
Sequence Clusters for the Sequence Entities in PDB 2AKA
Entity #1: Chains: A - myosin II heavy chain protein, length: 776 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 10 4644
95% 3 43 955
90% 3 43 981
70% 3 43 1017
50% 3 43 1063
40% 3 91 240
30% 5 116 213
Entity #2: Chains: L - LINKER protein, length: 13 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: B - Dynamin-1 protein, length: 299 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46089
95% 1 1 33080
90% 1 1 31745
70% 1 2 10598
50% 1 4 7174
40% 1 5 5803
30% 1 5 5181
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.