Sequence Similarity Clusters for the Entities in PDB 2AKA

Entity #1 | Chains: A
myosin II heavy chain protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 5052
95 % 3 43 1031
90 % 3 43 1054
70 % 3 43 1098
50 % 3 43 1145
40 % 3 94 262
30 % 5 119 219
Entity #2 | Chains: L
LINKER protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
Dynamin-1 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49668
95 % 1 1 35538
90 % 1 1 34047
70 % 1 2 11431
50 % 1 4 7723
40 % 1 5 6246
30 % 1 5 5555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.