Sequence Similarity Clusters for the Entities in PDB 2ADJ

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27917
95 % 4 5 14382 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 4 5 14149
70 % 1675 2362 1
50 % 3395 4781 1
40 % 3395 4781 1
30 % 4003 5635 1
Entity #2 | Chains: B
Q425 Fab Heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27682
95 % 3 3 23111 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 14 17 2338
70 % 1635 2311 2
50 % 3396 4781 1
40 % 3396 4781 1
30 % 4004 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4L5F 3 L Light chain of E106 antibody (kappa) VL anD CL domains 10090
2 2ADG 1 A Q425 Fab Light chain 10090
3 2ADI 1 A Q425 Fab Light chain 10090
4 2ADJ 1 A Q425 Fab Light chain 10090
5 3BQU 3 C 3H6 Fab light chain 10090