Sequence Similarity Clusters for the Entities in PDB 2ADJ

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29064
95 % 5 6 11338 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 5 6 10719
70 % 1817 2576 1
50 % 3696 5226 1
40 % 4191 5890 1
30 % 5220 7330 1
Entity #2 | Chains: B
Q425 Fab Heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 30001
95 % 3 3 26173 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 17 21 2073
70 % 1784 2532 2
50 % 3697 5226 1
40 % 4192 5890 1
30 % 5221 7330 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4L5F 3 L Light chain of E106 antibody (kappa) VL anD CL domains 10090
2 6BPA 3 C, F Monoclonal antibody 3E9 Fab light chain 10090
3 2ADG 1 A Q425 Fab Light chain 10090
4 2ADI 1 A Q425 Fab Light chain 10090
5 2ADJ 1 A Q425 Fab Light chain 10090
6 3BQU 3 C 3H6 Fab light chain 10090