Sequence Similarity Clusters for the Entities in PDB 2ADJ

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29780
95 % 5 6 11630 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 5 6 10981
70 % 1855 2634 1
50 % 3776 5348 1
40 % 4277 6031 1
30 % 5317 7494 1
Entity #2 | Chains: B
Q425 Fab Heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 30741
95 % 3 3 26802 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 19 23 1954
70 % 1824 2593 2
50 % 3777 5348 1
40 % 4278 6031 1
30 % 5318 7494 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures