Sequence Similarity Clusters for the Entities in PDB 2ADJ

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28422
95 % 4 5 14615 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 4 5 14383
70 % 1725 2426 1
50 % 3499 4913 1
40 % 3499 4913 1
30 % 4118 5780 1
Entity #2 | Chains: B
Q425 Fab Heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28184
95 % 3 3 23487 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 14 17 2389
70 % 1686 2376 2
50 % 3500 4913 1
40 % 3500 4913 1
30 % 4119 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures