Sequence Similarity Clusters for the Entities in PDB 2ADG

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28735
95 % 2 5 15445 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 2 5 14292
70 % 1236 2519 1
50 % 2532 5107 1
40 % 2904 5756 1
30 % 3563 7175 1
Entity #2 | Chains: B
Q425 Fab heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29656
95 % 1 3 25879 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 13 21 2054
70 % 1229 2478 2
50 % 2533 5107 1
40 % 2905 5756 1
30 % 3564 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures