Sequence Similarity Clusters for the Entities in PDB 2ADG

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27546
95 % 2 5 14179 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 2 5 13950
70 % 1111 2287 1
50 % 2276 4633 1
40 % 2276 4633 1
30 % 2604 5460 1
Entity #2 | Chains: B
Q425 Fab heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27311
95 % 1 3 22805
90 % 10 17 2299
70 % 1106 2244 2
50 % 2277 4633 1
40 % 2277 4633 1
30 % 2605 5460 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.