Sequence Similarity Clusters for the Entities in PDB 2ADG

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27104
95 % 2 5 13972 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 2 5 13739
70 % 1100 2264 1
50 % 2254 4587 1
40 % 2254 4587 1
30 % 2574 5392 1
Entity #2 | Chains: B
Q425 Fab heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26875
95 % 1 3 22415 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 10 17 2276
70 % 1095 2222 2
50 % 2255 4587 1
40 % 2255 4587 1
30 % 2575 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.