Sequence Similarity Clusters for the Entities in PDB 2ADG

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28782
95 % 2 5 14829 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 2 5 14588
70 % 1220 2474 1
50 % 2496 5011 1
40 % 2496 5011 1
30 % 2884 5941 1
Entity #2 | Chains: B
Q425 Fab heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28546
95 % 1 3 23785 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 10 17 2431
70 % 1210 2424 2
50 % 2497 5011 1
40 % 2497 5011 1
30 % 2885 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures