Sequence Similarity Clusters for the Entities in PDB 2ADG

Entity #1 | Chains: A
Q425 Fab Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28908
95 % 3 6 11278 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 3 6 10665
70 % 1250 2553 1
50 % 2564 5180 1
40 % 2939 5834 1
30 % 3605 7269 1
Entity #2 | Chains: B
Q425 Fab heavy chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29832
95 % 1 3 26024 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 13 21 2063
70 % 1243 2511 2
50 % 2565 5180 1
40 % 2940 5834 1
30 % 3606 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures