Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 789
95 % 41 52 834 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 44 790
70 % 42 54 832
50 % 42 54 886
40 % 139 169 275
30 % 179 211 226
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27789
95 % 1 3 24334 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 23530
70 % 1 4 13682
50 % 11 25 2274
40 % 28 47 1182
30 % 28 47 1166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
2 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
3 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details