Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 820
95 % 41 52 869 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 833
70 % 42 54 876
50 % 42 54 922
40 % 139 170 283
30 % 179 212 232
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28859
95 % 1 3 25219 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24355
70 % 1 4 14174
50 % 11 26 2288
40 % 28 48 1203
30 % 28 48 1191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
2 1RZO 2 B, D Agglutinin B chain 3988
3 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
4 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details