Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 46 853
95 % 41 53 881 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 55 844
70 % 42 55 892
50 % 42 55 938
40 % 142 174 304
30 % 182 216 244
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30198
95 % 1 3 26371 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 25432
70 % 1 4 14775
50 % 11 26 2395
40 % 28 50 1208
30 % 28 50 1187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EB2 2 B Beta-galactoside-specific lectin 1 chain B SEE REMARK 999 3972
2 1M2T 2 B mistletoe lectin I B chain 3972
3 1ONK 2 B Galactose specific lectin I B chain 3972
4 2RG9 2 B Beta-galactoside-specific lectin 1 chain B 3972
5 1ABR 2 B ABRIN-A 3816
6 1SZ6 2 B BETA-GALACTOSIDE SPECIFIC LECTIN I B CHAIN 3972
7 3D7W 2 B Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain B 3972 3.2.2.22 | Details
8 4JKX 2 B Beta-galactoside-specific lectin 1 B chain 3972 3.2.2.22 | Details
9 3O5W 2 B Beta-galactoside-specific lectin 1 chain B 3972 3.2.2.22 | Details
10 1PUU 2 B lectin I B chain 3972
11 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
12 6ELY 2 B Mistletoe Lectin I 3972
13 2ZR1 2 B, D Agglutinin-1 chain B 3816
14 1RZO 2 B, D Agglutinin B chain 3988
15 1PUM 2 B lectin I B chain 3972
16 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
17 1GGP 2 B PROTEIN (LECTIN 1 B CHAIN) 3677
18 2R9K 2 B Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain B, UNP residues 302-564 3972
19 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details
20 1OQL 2 B MISTLETOE LECTIN I 3972
21 1YF8 2 B Beta-galactoside-specific lectin 4 residues 1-255 3972 3.2.2.22 | Details
22 1CE7 2 B PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
23 2MLL 2 B PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
24 1TFM 2 B Himalayan mistletoe ribosome-inactivating protein 3972
25 2Q3N 2 B Agglutinin-1 B chain residues 281-547 3816
26 1PC8 2 B Himalayan mistletoe ribosome-inactivating protein 3972 3.2.2.22 | Details