Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 849
95 % 41 52 900 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 860
70 % 42 54 895
50 % 42 54 945
40 % 139 170 299
30 % 179 212 238
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29623
95 % 1 3 25888 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24976
70 % 1 4 14515
50 % 11 26 2345
40 % 28 50 1178
30 % 28 50 1159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3C9Z 1 A Agglutinin II 4202
2 3CA6 1 A Agglutinin II 4202
3 3CA1 1 A Agglutinin II 4202
4 3CA3 1 A Agglutinin II 4202
5 3CAH 1 A Agglutinin II 4202
6 3CA4 1 A Agglutinin II 4202
7 3CA5 1 A Agglutinin II 4202
8 4ZA3 2 B rRNA N-glycosidase UNP RESIDUES 288-547 3673 3.2.2.22 | Details
9 4Z9W 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
10 3CA0 1 A Agglutinin II 4202
11 4EB2 2 B Beta-galactoside-specific lectin 1 chain B SEE REMARK 999 3972
12 4ZGR 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
13 1M2T 2 B mistletoe lectin I B chain 3972
14 1ONK 2 B Galactose specific lectin I B chain 3972
15 2RG9 2 B Beta-galactoside-specific lectin 1 chain B 3972
16 1ABR 2 B ABRIN-A 3816
17 1SZ6 2 B BETA-GALACTOSIDE SPECIFIC LECTIN I B CHAIN 3972
18 4ZBV 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
19 4Z8S 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
20 4HR6 3 C LECTIN 50544
21 3D7W 2 B Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain B 3972 3.2.2.22 | Details
22 4ZFW 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
23 4JKX 2 B Beta-galactoside-specific lectin 1 B chain 3972 3.2.2.22 | Details
24 3O5W 2 B Beta-galactoside-specific lectin 1 chain B 3972 3.2.2.22 | Details
25 4ZFU 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
26 1PUU 2 B lectin I B chain 3972
27 4ZFY 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
28 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
29 6ELY 2 B Mistletoe Lectin I 3972
30 2ZR1 2 B, D Agglutinin-1 chain B 3816
31 1HWM 2 B EBULIN GALACTOSIDE SPECIFIC LECTIN 28503 3.2.2.22 | Details
32 1RZO 2 B, D Agglutinin B chain 3988
33 1PUM 2 B lectin I B chain 3972
34 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
35 1GGP 2 B PROTEIN (LECTIN 1 B CHAIN) 3677
36 4ZLB 2 B rRNA N-glycosidase UNP RESIDUES 287-547 3673 3.2.2.22 | Details
37 2R9K 2 B Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain B, UNP residues 302-564 3972
38 5Y42 3 C, F Seed lectin UNP residues 256-519 50544
39 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details
40 1OQL 2 B MISTLETOE LECTIN I 3972
41 1YF8 2 B Beta-galactoside-specific lectin 4 residues 1-255 3972 3.2.2.22 | Details
42 1CE7 2 B PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
43 2MLL 2 B PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
44 1TFM 2 B Himalayan mistletoe ribosome-inactivating protein 3972
45 1HWO 2 B EBULIN GALACTOSIDE SPECIFIC LECTIN 28503 3.2.2.22 | Details
46 5Y97 3 C Seed lectin UNP residues 256-519 50544
47 1HWP 2 B EBULIN GALACTOSIDE SPECIFIC LECTIN 28503 3.2.2.22 | Details
48 1HWN 2 B EBULIN GALACTOSIDE SPECIFIC LECTIN 28503 3.2.2.22 | Details
49 2Q3N 2 B Agglutinin-1 B chain residues 281-547 3816
50 1PC8 2 B Himalayan mistletoe ribosome-inactivating protein 3972 3.2.2.22 | Details