Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 871
95 % 41 52 912 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 867
70 % 42 54 907
50 % 42 54 963
40 % 139 170 308
30 % 179 212 245
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30009
95 % 1 3 26221 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 25285
70 % 1 4 14687
50 % 11 26 2379
40 % 28 50 1201
30 % 28 50 1181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
2 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
3 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details