Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 42 746
95 % 41 52 823 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 797
70 % 42 54 834
50 % 42 54 880
40 % 52 79 622
30 % 178 210 213
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27322
95 % 1 3 22849 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 22178
70 % 1 4 13297
50 % 11 25 2237
40 % 28 47 1182
30 % 28 47 1165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2AAI 2 B RICIN (B CHAIN) 3988 3.2.2.22 | Details
2 3RTI 2 B Ricin Ricin B chain 3988 3.2.2.22 | Details
3 3RTJ 3 B Ricin B chain 3988 3.2.2.22 | Details