Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 871
95 % 41 52 912 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 867
70 % 42 54 907
50 % 42 54 963
40 % 139 170 308
30 % 179 212 245
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30009
95 % 1 3 26221 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 25285
70 % 1 4 14687
50 % 11 26 2379
40 % 28 50 1201
30 % 28 50 1181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3PX8 1 X Preproricin UNP residues 18-275 3988
2 2VC4 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
3 1UQ5 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
4 5DDZ 1 A Ricin 3988 3.2.2.22 | Details
5 4Z9K 1 A Ricin UNP residues 39-296 3988 3.2.2.22 | Details
6 1J1M 1 A Ricin 3988 3.2.2.22 | Details
7 4HUO 1 X Ricin 3988 3.2.2.22 | Details
8 4HV3 1 A Ricin 3988 3.2.2.22 | Details
9 2VC3 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
10 4MX5 1 X Ricin A chain 3988 3.2.2.22 | Details
11 4LGR 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
12 5J57 1 A Ricin UNP residues 39-302 3988 3.2.2.22 | Details
13 4MX1 1 A Ricin A chain 3988 3.2.2.22 | Details
14 5J56 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
15 4HUP 1 X Ricin 3988 3.2.2.22 | Details
16 1UQ4 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
17 4LHJ 1 A Ricin UNP residues 39-297 3988 3.2.2.22 | Details
18 1IFT 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
19 3PX9 1 X Preproricin UNP residues 18-275 3988
20 4HV7 1 X Ricin 3988 3.2.2.22 | Details
21 2PJO 1 A Ricin (EC 3.2.2.22) 3988 3.2.2.22 | Details
22 4ESI 1 A Ricin 3988 3.2.2.22 | Details
23 1IFS 1 A RICIN COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX) A CHAIN 3988 3.2.2.22 | Details
24 5E1H 1 A Ricin 3988 3.2.2.22 | Details
25 3HIO 1 A Ricin 3988 3.2.2.22 | Details
26 3BJG 1 A Ricin A chain (rRNA N-glycosidase) 3988 3.2.2.22 | Details
27 1BR6 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
28 2P8N 1 A Ricin A chain residues 36-302 3988 3.2.2.22 | Details
29 3SRP 1 A Ricin A chain 3988 3.2.2.22 | Details
30 2R3D 1 A Ricin A chain (EC 3.2.2.22) Unp residues 36-302 3988 3.2.2.22 | Details
31 4Q2V 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
32 4LHQ 1 A, C Ricin UNP residues 39-298 3988 3.2.2.22 | Details
33 1OBS 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
34 1BR5 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
35 1RTC 1 A RICIN 3988 3.2.2.22 | Details
36 1IFU 1 A RICIN COMPLEX WITH FORMYCIN A CHAIN 3988 3.2.2.22 | Details
37 3EJ5 1 X Ricin A chain sequence database residues 40-296 3988 3.2.2.22 | Details
38 5U4M 1 A Ricin residues 40-294 3988 3.2.2.22 | Details
39 4LGP 1 A, C Ricin UNP residues 36-296 3988 3.2.2.22 | Details
40 5U4L 1 A Ricin residues 36-302 3988 3.2.2.22 | Details
41 2AAI 1 A RICIN (A CHAIN) 3988 3.2.2.22 | Details
42 4LGS 1 A Ricin UNP residues 39-301 3988 3.2.2.22 | Details
43 2R2X 1 A Ricin A chain 3988 3.2.2.22 | Details
44 1IL4 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
45 1OBT 1 A RICIN A CHAIN COMPLEXED WITH AMP 3988 3.2.2.22 | Details
46 1IL3 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
47 3RTI 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
48 3RTJ 2 A Ricin A chain 3988 3.2.2.22 | Details
49 1IL5 1 A, B RICIN A CHAIN 3988 3.2.2.22 | Details
50 4KUC 1 A, I Ricin 3988 3.2.2.22 | Details
51 5BOZ 1 A, B, C, D, E, F Ricin UNP residues 39-298 3988 3.2.2.22 | Details
52 1IL9 1 A RICIN A CHAIN 3988 3.2.2.22 | Details