Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 849
95 % 41 52 900 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 860
70 % 42 54 895
50 % 42 54 945
40 % 139 170 299
30 % 179 212 238
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29623
95 % 1 3 25888 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24976
70 % 1 4 14515
50 % 11 26 2345
40 % 28 50 1178
30 % 28 50 1159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3BWH 1 A cucurmosin 3662
2 4YP2 1 B Ribosome-inactivating protein momordin I UNP residues 24-269 3673 3.2.2.22 | Details
3 3PX8 1 X Preproricin UNP residues 18-275 3988
4 2VC4 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
5 1UQ5 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
6 5DDZ 1 A Ricin 3988 3.2.2.22 | Details
7 5CF9 1 B Ribosome-inactivating protein momordin I residues 24-269 3673 3.2.2.22 | Details
8 2OQA 1 A, B Luffaculin 1 56866
9 4Z9K 1 A Ricin UNP residues 39-296 3988 3.2.2.22 | Details
10 1J1M 1 A Ricin 3988 3.2.2.22 | Details
11 4DWM 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
12 4HUO 1 X Ricin 3988 3.2.2.22 | Details
13 3SJ6 1 A Ribosome inactivating protein 3672
14 1MRJ 1 A ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
15 4HV3 1 A Ricin 3988 3.2.2.22 | Details
16 1MRK 1 A ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
17 2VC3 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
18 4MX5 1 X Ricin A chain 3988 3.2.2.22 | Details
19 4L66 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
20 4GUW 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
21 5GU4 1 A, B Ricin UNP residues 36-302 3988 3.2.2.22 | Details
22 4LGR 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
23 3N1D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
24 5ILX 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
25 5J57 1 A Ricin UNP residues 39-302 3988 3.2.2.22 | Details
26 5Y48 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
27 4KMK 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
28 3S9Q 1 A Ribosome inactivating protein A 3672 3.2.2.22 | Details
29 3V14 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
30 3MRW 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
31 1TCS 1 A TRICHOSANTHIN 3677 3.2.2.22 | Details
32 3U6Z 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
33 5CST 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
34 3NX9 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
35 4LT4 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
36 4Q9F 1 A Ribosome inactivating protein rRNA N-glycosidase 3672 3.2.2.22 | Details
37 4FZ9 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
38 4MX1 1 A Ricin A chain 3988 3.2.2.22 | Details
39 4FXA 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
40 5GM7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
41 1GIS 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
42 4EMF 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
43 5J56 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
44 4M5A 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
45 3N3X 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
46 4HUP 1 X Ricin 3988 3.2.2.22 | Details
47 4LWX 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
48 5CSO 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
49 4KWN 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
50 1QD2 1 A TRICHOSANTHIN 3677 3.2.2.22 | Details
51 3Q4P 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
52 4ZU0 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
53 4JTP 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
54 5WV1 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
55 4JTB 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
56 1UQ4 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
57 4K2Z 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
58 4O4Q 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
59 4EMR 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
60 5CIX 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
61 1MRG 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
62 3QJI 1 A Ribosome inactivating protein A 3672 3.2.2.22 | Details
63 1NLI 1 A Ribosome-inactivating protein alpha-trichosanthin 3677 3.2.2.22 | Details
64 4LHJ 1 A Ricin UNP residues 39-297 3988 3.2.2.22 | Details
65 5GZ7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
66 3U8F 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
67 1GIU 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
68 4KL4 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
69 5ILW 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
70 3U6T 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
71 1IFT 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
72 1NIO 1 A b-luffin residues 1-247 3670 3.2.2.22 | Details
73 3U70 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
74 4ZZ6 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
75 4LRO 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
76 4RZJ 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
77 4EB2 1 A Beta-galactoside-specific lectin 1 chain A SEE REMARK 999 3972 3.2.2.22 | Details
78 3PX9 1 X Preproricin UNP residues 18-275 3988
79 4HV7 1 X Ricin 3988 3.2.2.22 | Details
80 3N5D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
81 3RL9 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
82 4O8E 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
83 1J4G 1 A, B, C, D Trichosanthin delta C7 3677 3.2.2.22 | Details
84 4ZT8 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
85 2PJO 1 A Ricin (EC 3.2.2.22) 3988 3.2.2.22 | Details
86 1AHC 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
87 1M2T 1 A mistletoe lectin I A chain 3972 3.2.2.22 | Details
88 3MRY 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
89 1ONK 1 A Beta-galactoside specific lectin I A chain 3972 3.2.2.22 | Details
90 3V2K 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
91 1MRH 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
92 4ESI 1 A Ricin 3988 3.2.2.22 | Details
93 4HOA 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
94 4H0Z 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
95 3N31 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
96 1IFS 1 A RICIN COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX) A CHAIN 3988 3.2.2.22 | Details
97 2RG9 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
98 2JDL 1 A, B RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN RESIDUES 25-270 3677 3.2.2.22 | Details
99 5E1H 1 A Ricin 3988 3.2.2.22 | Details
100 1AHB 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
101 3HIO 1 A Ricin 3988 3.2.2.22 | Details
102 1ABR 1 A ABRIN-A 3816
103 1MOM 1 A MOMORDIN 3673 3.2.2.22 | Details
104 1SZ6 1 A RRNA N-GLYCOSIDASE A CHAIN 3972
105 3N1N 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
106 1AHA 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
107 3N2D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
108 1MRI 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
109 3BJG 1 A Ricin A chain (rRNA N-glycosidase) 3988 3.2.2.22 | Details
110 1BR6 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
111 3NJS 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
112 1F8Q 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
113 2P8N 1 A Ricin A chain residues 36-302 3988 3.2.2.22 | Details
114 3SRP 1 A Ricin A chain 3988 3.2.2.22 | Details
115 2JJR 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
116 2R3D 1 A Ricin A chain (EC 3.2.2.22) Unp residues 36-302 3988 3.2.2.22 | Details
117 4Q2V 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
118 4LHQ 1 A, C Ricin UNP residues 39-298 3988 3.2.2.22 | Details
119 1OBS 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
120 1BRY 1 Y, Z BRYODIN I RESIDUES 1 - 247 3652 3.2.2.22 | Details
121 2VS6 1 A, B RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
122 1CF5 1 A, B PROTEIN (BETA-MOMORCHARIN) 3673 3.2.2.22 | Details
123 3D7W 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
124 4I47 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
125 4F9N 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
126 4XY7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
127 1BR5 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
128 1RTC 1 A RICIN 3988 3.2.2.22 | Details
129 1IFU 1 A RICIN COMPLEX WITH FORMYCIN A CHAIN 3988 3.2.2.22 | Details
130 4JKX 1 A Beta-galactoside-specific lectin 1 A chain 3972 3.2.2.22 | Details
131 3MY6 1 A Ribosome-inactivating protein momordin I 3672 3.2.2.22 | Details
132 3EJ5 1 X Ricin A chain sequence database residues 40-296 3988 3.2.2.22 | Details
133 5U4M 1 A Ricin residues 40-294 3988 3.2.2.22 | Details
134 4O0O 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
135 3O5W 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
136 1PUU 1 A lectin I A chain 3972
137 4LGP 1 A, C Ricin UNP residues 36-296 3988 3.2.2.22 | Details
138 5U4L 1 A Ricin residues 36-302 3988 3.2.2.22 | Details
139 2AAI 1 A RICIN (A CHAIN) 3988 3.2.2.22 | Details
140 6ELY 1 A Mistletoe Lectin I 3972
141 2ZR1 1 A, C Agglutinin-1 chain A 3816 3.2.2.22 | Details
142 3NFM 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
143 4LGS 1 A Ricin UNP residues 39-301 3988 3.2.2.22 | Details
144 2R2X 1 A Ricin A chain 3988 3.2.2.22 | Details
145 1HWM 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
146 1IL4 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
147 1OBT 1 A RICIN A CHAIN COMPLEXED WITH AMP 3988 3.2.2.22 | Details
148 1RZO 1 A, C Agglutinin A chain 3988 3.2.2.22 | Details
149 1IL3 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
150 1PUM 1 A lectin I A chain 3972
151 3RTI 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
152 1GGP 1 A PROTEIN (LECTIN 1 A CHAIN) 3677
153 4KPV 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
154 2R9K 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1, UNP residues 34-287 3972
155 3RTJ 2 A Ricin A chain 3988 3.2.2.22 | Details
156 1OQL 1 A MISTLETOE LECTIN I 3972 3.2.2.22 | Details
157 1IL5 1 A, B RICIN A CHAIN 3988 3.2.2.22 | Details
158 1YF8 1 A Beta-galactoside-specific lectin 4 residues 1-240 3972 3.2.2.22 | Details
159 1CE7 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
160 2MLL 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
161 4KUC 1 A, I Ricin 3988 3.2.2.22 | Details
162 1TFM 1 A Himalayan mistletoe ribosome-inactivating protein 3972
163 1HWO 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
164 5BOZ 1 A, B, C, D, E, F Ricin UNP residues 39-298 3988 3.2.2.22 | Details
165 1HWP 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
166 1HWN 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
167 2Q3N 1 A Agglutinin-1 A chain residues 21-280 3816 3.2.2.22 | Details
168 1IL9 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
169 1PC8 1 A Himalayan mistletoe ribosome-inactivating protein 3972 3.2.2.22 | Details
170 1D8V 1 A ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30 3673 3.2.2.22 | Details