Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 42 747
95 % 41 52 824 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 799
70 % 42 54 837
50 % 42 54 882
40 % 52 79 622
30 % 178 210 213
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27402
95 % 1 3 22916 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 22238
70 % 1 4 13340
50 % 11 25 2244
40 % 28 47 1184
30 % 28 47 1166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3PX8 1 X Preproricin UNP residues 18-275 3988
2 2VC4 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
3 1UQ5 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
4 5DDZ 1 A Ricin 3988 3.2.2.22 | Details
5 4Z9K 1 A Ricin UNP residues 39-296 3988 3.2.2.22 | Details
6 1J1M 1 A Ricin 3988 3.2.2.22 | Details
7 4HUO 1 X Ricin 3988 3.2.2.22 | Details
8 4HV3 1 A Ricin 3988 3.2.2.22 | Details
9 2VC3 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
10 4MX5 1 X Ricin A chain 3988 3.2.2.22 | Details
11 5GU4 1 A, B Ricin UNP residues 36-302 3988 3.2.2.22 | Details
12 4LGR 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
13 5J57 1 A Ricin UNP residues 39-302 3988 3.2.2.22 | Details
14 4MX1 1 A Ricin A chain 3988 3.2.2.22 | Details
15 5J56 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
16 4HUP 1 X Ricin 3988 3.2.2.22 | Details
17 1UQ4 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
18 4LHJ 1 A Ricin UNP residues 39-297 3988 3.2.2.22 | Details
19 1IFT 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
20 4EB2 1 A Beta-galactoside-specific lectin 1 chain A SEE REMARK 999 3972 3.2.2.22 | Details
21 3PX9 1 X Preproricin UNP residues 18-275 3988
22 4HV7 1 X Ricin 3988 3.2.2.22 | Details
23 2PJO 1 A Ricin (EC 3.2.2.22) 3988 3.2.2.22 | Details
24 1M2T 1 A mistletoe lectin I A chain 3972 3.2.2.22 | Details
25 1ONK 1 A Beta-galactoside specific lectin I A chain 3972 3.2.2.22 | Details
26 4ESI 1 A Ricin 3988 3.2.2.22 | Details
27 1IFS 1 A RICIN COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX) A CHAIN 3988 3.2.2.22 | Details
28 2RG9 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
29 5E1H 1 A Ricin 3988 3.2.2.22 | Details
30 3HIO 1 A Ricin 3988 3.2.2.22 | Details
31 1ABR 1 A ABRIN-A 3816
32 1SZ6 1 A RRNA N-GLYCOSIDASE A CHAIN 3972
33 3BJG 1 A Ricin A chain (rRNA N-glycosidase) 3988 3.2.2.22 | Details
34 1BR6 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
35 2P8N 1 A Ricin A chain residues 36-302 3988 3.2.2.22 | Details
36 3SRP 1 A Ricin A chain 3988 3.2.2.22 | Details
37 2R3D 1 A Ricin A chain (EC 3.2.2.22) Unp residues 36-302 3988 3.2.2.22 | Details
38 4Q2V 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
39 4LHQ 1 A, C Ricin UNP residues 39-298 3988 3.2.2.22 | Details
40 1OBS 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
41 3D7W 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
42 1BR5 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
43 1RTC 1 A RICIN 3988 3.2.2.22 | Details
44 1IFU 1 A RICIN COMPLEX WITH FORMYCIN A CHAIN 3988 3.2.2.22 | Details
45 4JKX 1 A Beta-galactoside-specific lectin 1 A chain 3972 3.2.2.22 | Details
46 3EJ5 1 X Ricin A chain sequence database residues 40-296 3988 3.2.2.22 | Details
47 5U4M 1 A Ricin residues 40-294 3988 3.2.2.22 | Details
48 3O5W 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
49 1PUU 1 A lectin I A chain 3972
50 4LGP 1 A, C Ricin UNP residues 36-296 3988 3.2.2.22 | Details
51 5U4L 1 A Ricin residues 36-302 3988 3.2.2.22 | Details
52 2AAI 1 A RICIN (A CHAIN) 3988 3.2.2.22 | Details
53 2ZR1 1 A, C Agglutinin-1 chain A 3816 3.2.2.22 | Details
54 4LGS 1 A Ricin UNP residues 39-301 3988 3.2.2.22 | Details
55 2R2X 1 A Ricin A chain 3988 3.2.2.22 | Details
56 1HWM 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
57 1IL4 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
58 1OBT 1 A RICIN A CHAIN COMPLEXED WITH AMP 3988 3.2.2.22 | Details
59 1RZO 1 A, C Agglutinin A chain 3988 3.2.2.22 | Details
60 1IL3 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
61 1PUM 1 A lectin I A chain 3972
62 3RTI 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
63 1GGP 1 A PROTEIN (LECTIN 1 A CHAIN) 3677
64 2R9K 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1, UNP residues 34-287 3972
65 3RTJ 2 A Ricin A chain 3988 3.2.2.22 | Details
66 1OQL 1 A MISTLETOE LECTIN I 3972 3.2.2.22 | Details
67 1IL5 1 A, B RICIN A CHAIN 3988 3.2.2.22 | Details
68 1YF8 1 A Beta-galactoside-specific lectin 4 residues 1-240 3972 3.2.2.22 | Details
69 1CE7 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
70 2MLL 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
71 4KUC 1 A, I Ricin 3988 3.2.2.22 | Details
72 1TFM 1 A Himalayan mistletoe ribosome-inactivating protein 3972
73 1HWO 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
74 5BOZ 1 A, B, C, D, E, F Ricin UNP residues 39-298 3988 3.2.2.22 | Details
75 1HWP 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
76 1HWN 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
77 2Q3N 1 A Agglutinin-1 A chain residues 21-280 3816 3.2.2.22 | Details
78 1IL9 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
79 1PC8 1 A Himalayan mistletoe ribosome-inactivating protein 3972 3.2.2.22 | Details