Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 818
95 % 41 52 863 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 819
70 % 42 54 861
50 % 42 54 915
40 % 139 170 283
30 % 179 212 229
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28702
95 % 1 3 25089 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24233
70 % 1 4 14100
50 % 11 26 2272
40 % 28 48 1198
30 % 28 48 1186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3BWH 1 A cucurmosin 3662
2 2Z4U 1 A Ribosome-inactivating protein PD-L4 29725 3.2.2.22 | Details
3 2QES 1 A Ribosome-inactivating protein PD-L4 29725 3.2.2.22 | Details
4 2QET 1 A Ribosome-inactivating protein PD-L4 29725 3.2.2.22 | Details
5 2Z53 1 A Ribosome-inactivating protein PD-L4 29725 3.2.2.22 | Details
6 3MVG 1 A, B Ribosome inactivating type 1 protein 35876 3.2.2.22 | Details
7 4YP2 1 B Ribosome-inactivating protein momordin I UNP residues 24-269 3673 3.2.2.22 | Details
8 3PX8 1 X Preproricin UNP residues 18-275 3988
9 2VC4 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
10 1UQ5 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
11 1RL0 1 A Antiviral protein DAP-30 residues 24-278 3570 3.2.2.22 | Details
12 5DDZ 1 A Ricin 3988 3.2.2.22 | Details
13 5CF9 1 B Ribosome-inactivating protein momordin I residues 24-269 3673 3.2.2.22 | Details
14 2OQA 1 A, B Luffaculin 1 56866
15 3H5K 1 A, B Ribosome-inactivating protein PD-L1/PD-L2 29725 3.2.2.22 | Details
16 4Z9K 1 A Ricin UNP residues 39-296 3988 3.2.2.22 | Details
17 1J1M 1 A Ricin 3988 3.2.2.22 | Details
18 3HIS 1 A, B Vacuolar saporin 3572 3.2.2.22 | Details
19 4DWM 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
20 4HUO 1 X Ricin 3988 3.2.2.22 | Details
21 3SJ6 1 A Ribosome inactivating protein 3672
22 1MRJ 1 A ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
23 4HV3 1 A Ricin 3988 3.2.2.22 | Details
24 1MRK 1 A ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
25 2VC3 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
26 4MX5 1 X Ricin A chain 3988 3.2.2.22 | Details
27 4ZA3 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
28 4L66 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
29 4GUW 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
30 2G5X 1 A Ribosome-inactivating protein 39855 3.2.2.22 | Details
31 5GU4 1 A, B Ricin UNP residues 36-302 3988 3.2.2.22 | Details
32 4LGR 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
33 3N1D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
34 5ILX 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
35 5J57 1 A Ricin UNP residues 39-302 3988 3.2.2.22 | Details
36 1LLN 1 A Antiviral Protein 3 3527 3.2.2.22 | Details
37 5Y48 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
38 1LP8 1 A DIANTHIN 30 3570 3.2.2.22 | Details
39 4KMK 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
40 2Q8W 1 A POKEWEED ANTIVIRAL PROTEIN 3528 3.2.2.22 | Details
41 3KTZ 1 A, B Ribosome-inactivating protein gelonin (UNP residue 47-297) 3979 3.2.2.22 | Details
42 3S9Q 1 A Ribosome inactivating protein A 3672 3.2.2.22 | Details
43 3V14 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
44 3MRW 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
45 1TCS 1 A TRICHOSANTHIN 3677 3.2.2.22 | Details
46 3U6Z 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
47 1LPD 1 A Dianthin 30 3570 3.2.2.22 | Details
48 5CST 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
49 3NX9 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
50 4LT4 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
51 4Q9F 1 A Ribosome inactivating protein rRNA N-glycosidase 3672 3.2.2.22 | Details
52 4FZ9 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
53 4MX1 1 A Ricin A chain 3988 3.2.2.22 | Details
54 4FXA 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
55 5GM7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
56 1GIS 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
57 4EMF 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
58 1LPC 1 A DIANTHIN 30 3570 3.2.2.22 | Details
59 3LE7 1 A, B Ribosome-inactivating protein PD-L1/PD-L2 29725 3.2.2.22 | Details
60 4Z9W 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
61 1J1Q 1 A Antiviral protein S 3527 3.2.2.22 | Details
62 5J56 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
63 4M5A 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
64 3CTK 1 A rRNA N-glycosidase 146096 3.2.2.22 | Details
65 3N3X 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
66 4HUP 1 X Ricin 3988 3.2.2.22 | Details
67 4LWX 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
68 5CSO 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
69 4KWN 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
70 1QD2 1 A TRICHOSANTHIN 3677 3.2.2.22 | Details
71 1GIK 1 A ANTIVIRAL PROTEIN S 3527 3.2.2.22 | Details
72 3Q4P 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
73 3HIW 1 A, B Vacuolar saporin 3572 3.2.2.22 | Details
74 4ZU0 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
75 4JTP 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
76 5WV1 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
77 4JTB 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
78 1UQ4 1 A RICIN A CHAIN, RESIDUES 40-302 3988 3.2.2.22 | Details
79 4K2Z 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
80 4O4Q 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
81 4EMR 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
82 5CIX 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
83 1MRG 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
84 3QJI 1 A Ribosome inactivating protein A 3672 3.2.2.22 | Details
85 1J1R 1 A Antiviral Protein S 3527 3.2.2.22 | Details
86 1NLI 1 A Ribosome-inactivating protein alpha-trichosanthin 3677 3.2.2.22 | Details
87 4LHJ 1 A Ricin UNP residues 39-297 3988 3.2.2.22 | Details
88 5GZ7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
89 3U8F 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
90 1GIU 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
91 4KL4 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
92 5ILW 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
93 3U6T 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
94 1IFT 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
95 1NIO 1 A b-luffin residues 1-247 3670 3.2.2.22 | Details
96 3U70 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
97 4ZZ6 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
98 1J1S 1 A Antiviral Protein S 3527 3.2.2.22 | Details
99 4LRO 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
100 4RZJ 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
101 4EB2 1 A Beta-galactoside-specific lectin 1 chain A SEE REMARK 999 3972 3.2.2.22 | Details
102 3PX9 1 X Preproricin UNP residues 18-275 3988
103 4HV7 1 X Ricin 3988 3.2.2.22 | Details
104 3N5D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
105 4ZGR 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
106 3RL9 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
107 3KU0 1 A, B Ribosome-inactivating protein gelonin (UNP RESIDUES 47-297) 3979 3.2.2.22 | Details
108 4O8E 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
109 1J4G 1 A, B, C, D Trichosanthin delta C7 3677 3.2.2.22 | Details
110 4ZT8 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
111 2PJO 1 A Ricin (EC 3.2.2.22) 3988 3.2.2.22 | Details
112 1AHC 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
113 1M2T 1 A mistletoe lectin I A chain 3972 3.2.2.22 | Details
114 1QI7 1 A PROTEIN (N-GLYCOSIDASE) 3572 3.2.2.22 | Details
115 3MRY 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
116 1ONK 1 A Beta-galactoside specific lectin I A chain 3972 3.2.2.22 | Details
117 3V2K 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
118 1MRH 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
119 4ESI 1 A Ricin 3988 3.2.2.22 | Details
120 4HOA 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
121 4H0Z 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
122 3N31 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
123 1IFS 1 A RICIN COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX) A CHAIN 3988 3.2.2.22 | Details
124 2RG9 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
125 2JDL 1 A, B RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN RESIDUES 25-270 3677 3.2.2.22 | Details
126 5E1H 1 A Ricin 3988 3.2.2.22 | Details
127 1D6A 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
128 1AHB 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
129 3HIO 1 A Ricin 3988 3.2.2.22 | Details
130 1ABR 1 A ABRIN-A 3816
131 1MOM 1 A MOMORDIN 3673 3.2.2.22 | Details
132 1SZ6 1 A RRNA N-GLYCOSIDASE A CHAIN 3972
133 3HIV 1 A, B Vacuolar saporin 3572 3.2.2.22 | Details
134 3N1N 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
135 1AHA 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
136 1QCI 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
137 1QCG 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
138 4ZBV 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
139 3N2D 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
140 1APA 1 A POKEWEED ANTIVIRAL PROTEIN 3527
141 1MRI 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
142 3HIT 1 A, B Vacuolar saporin 3572 3.2.2.22 | Details
143 3BJG 1 A Ricin A chain (rRNA N-glycosidase) 3988 3.2.2.22 | Details
144 4Z8S 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
145 1BR6 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
146 3NJS 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
147 1F8Q 1 A ALPHA-MOMORCHARIN 3673 3.2.2.22 | Details
148 2P8N 1 A Ricin A chain residues 36-302 3988 3.2.2.22 | Details
149 3SRP 1 A Ricin A chain 3988 3.2.2.22 | Details
150 2JJR 1 A RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
151 1QCJ 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
152 2R3D 1 A Ricin A chain (EC 3.2.2.22) Unp residues 36-302 3988 3.2.2.22 | Details
153 4Q2V 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
154 4LHQ 1 A, C Ricin UNP residues 39-298 3988 3.2.2.22 | Details
155 1OBS 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
156 1BRY 1 Y, Z BRYODIN I RESIDUES 1 - 247 3652 3.2.2.22 | Details
157 1PAF 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
158 2VS6 1 A, B RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN 3677 3.2.2.22 | Details
159 1CF5 1 A, B PROTEIN (BETA-MOMORCHARIN) 3673 3.2.2.22 | Details
160 3D7W 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
161 4ZFW 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
162 4I47 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
163 4F9N 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
164 4XY7 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
165 1BR5 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
166 1RTC 1 A RICIN 3988 3.2.2.22 | Details
167 1IFU 1 A RICIN COMPLEX WITH FORMYCIN A CHAIN 3988 3.2.2.22 | Details
168 4JKX 1 A Beta-galactoside-specific lectin 1 A chain 3972 3.2.2.22 | Details
169 3MY6 1 A Ribosome-inactivating protein momordin I 3672 3.2.2.22 | Details
170 3EJ5 1 X Ricin A chain sequence database residues 40-296 3988 3.2.2.22 | Details
171 5U4M 1 A Ricin residues 40-294 3988 3.2.2.22 | Details
172 4O0O 1 A rRNA N-glycosidase A 3672 3.2.2.22 | Details
173 3O5W 1 A Beta-galactoside-specific lectin 1 chain A isoform 1 3972 3.2.2.22 | Details
174 4ZFU 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
175 1PUU 1 A lectin I A chain 3972
176 4ZFY 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
177 4LGP 1 A, C Ricin UNP residues 36-296 3988 3.2.2.22 | Details
178 5U4L 1 A Ricin residues 36-302 3988 3.2.2.22 | Details
179 2AAI 1 A RICIN (A CHAIN) 3988 3.2.2.22 | Details
180 6ELY 1 A Mistletoe Lectin I 3972
181 2ZR1 1 A, C Agglutinin-1 chain A 3816 3.2.2.22 | Details
182 3NFM 1 A Ribosome inactivating protein 3672 3.2.2.22 | Details
183 4LGS 1 A Ricin UNP residues 39-301 3988 3.2.2.22 | Details
184 2R2X 1 A Ricin A chain 3988 3.2.2.22 | Details
185 1HWM 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
186 1IL4 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
187 1OBT 1 A RICIN A CHAIN COMPLEXED WITH AMP 3988 3.2.2.22 | Details
188 1PAG 1 A, B POKEWEED ANTIVIRAL PROTEIN 3527 3.2.2.22 | Details
189 1RZO 1 A, C Agglutinin A chain 3988 3.2.2.22 | Details
190 1IL3 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
191 1PUM 1 A lectin I A chain 3972
192 3RTI 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
193 1GGP 1 A PROTEIN (LECTIN 1 A CHAIN) 3677
194 4ZLB 1 A rRNA N-glycosidase UNP RESIDUES 24-270 3673 3.2.2.22 | Details
195 4KPV 1 A rRNA N-glycosidase 3672 3.2.2.22 | Details
196 2R9K 1 A Beta-galactoside-specific lectin 1 Beta-galactoside-specific lectin 1 chain A isoform 1, UNP residues 34-287 3972
197 3RTJ 2 A Ricin A chain 3988 3.2.2.22 | Details
198 1OQL 1 A MISTLETOE LECTIN I 3972 3.2.2.22 | Details
199 1IL5 1 A, B RICIN A CHAIN 3988 3.2.2.22 | Details
200 1YF8 1 A Beta-galactoside-specific lectin 4 residues 1-240 3972 3.2.2.22 | Details
201 1CE7 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
202 2MLL 1 A PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II) 3972
203 4KUC 1 A, I Ricin 3988 3.2.2.22 | Details
204 1TFM 1 A Himalayan mistletoe ribosome-inactivating protein 3972
205 1HWO 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
206 5BOZ 1 A, B, C, D, E, F Ricin UNP residues 39-298 3988 3.2.2.22 | Details
207 1HWP 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
208 1HWN 1 A EBULIN N-GLYCOSIDASE 28503 3.2.2.22 | Details
209 2Q3N 1 A Agglutinin-1 A chain residues 21-280 3816 3.2.2.22 | Details
210 1IL9 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
211 1PC8 1 A Himalayan mistletoe ribosome-inactivating protein 3972 3.2.2.22 | Details
212 1D8V 1 A ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30 3673 3.2.2.22 | Details