Sequence Similarity Clusters for the Entities in PDB 2AAI

Entity #1 | Chains: A
RICIN (A CHAIN) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 45 822
95 % 41 52 868 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 42 54 825
70 % 42 54 862
50 % 42 54 920
40 % 139 170 284
30 % 179 212 231
Entity #2 | Chains: B
RICIN (B CHAIN) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28820
95 % 1 3 25184 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 24326
70 % 1 4 14154
50 % 11 26 2277
40 % 28 48 1202
30 % 28 48 1191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3PX8 1 X Preproricin UNP residues 18-275 3988
2 2VC4 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
3 5DDZ 1 A Ricin 3988 3.2.2.22 | Details
4 4Z9K 1 A Ricin UNP residues 39-296 3988 3.2.2.22 | Details
5 1J1M 1 A Ricin 3988 3.2.2.22 | Details
6 4HUO 1 X Ricin 3988 3.2.2.22 | Details
7 4HV3 1 A Ricin 3988 3.2.2.22 | Details
8 2VC3 1 A RICIN A CHAIN RESIDUES 36-302 3988 3.2.2.22 | Details
9 4MX5 1 X Ricin A chain 3988 3.2.2.22 | Details
10 4LGR 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
11 5J57 1 A Ricin UNP residues 39-302 3988 3.2.2.22 | Details
12 4MX1 1 A Ricin A chain 3988 3.2.2.22 | Details
13 5J56 1 A Ricin UNP residues 40-294 3988 3.2.2.22 | Details
14 4HUP 1 X Ricin 3988 3.2.2.22 | Details
15 4LHJ 1 A Ricin UNP residues 39-297 3988 3.2.2.22 | Details
16 1IFT 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
17 3PX9 1 X Preproricin UNP residues 18-275 3988
18 4HV7 1 X Ricin 3988 3.2.2.22 | Details
19 2PJO 1 A Ricin (EC 3.2.2.22) 3988 3.2.2.22 | Details
20 4ESI 1 A Ricin 3988 3.2.2.22 | Details
21 1IFS 1 A RICIN COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX) A CHAIN 3988 3.2.2.22 | Details
22 5E1H 1 A Ricin 3988 3.2.2.22 | Details
23 3HIO 1 A Ricin 3988 3.2.2.22 | Details
24 1BR6 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
25 2P8N 1 A Ricin A chain residues 36-302 3988 3.2.2.22 | Details
26 2R3D 1 A Ricin A chain (EC 3.2.2.22) Unp residues 36-302 3988 3.2.2.22 | Details
27 4Q2V 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
28 4LHQ 1 A, C Ricin UNP residues 39-298 3988 3.2.2.22 | Details
29 1BR5 1 A PROTEIN (RICIN) 3988 3.2.2.22 | Details
30 1RTC 1 A RICIN 3988 3.2.2.22 | Details
31 1IFU 1 A RICIN COMPLEX WITH FORMYCIN A CHAIN 3988 3.2.2.22 | Details
32 5U4M 1 A Ricin residues 40-294 3988 3.2.2.22 | Details
33 4LGP 1 A, C Ricin UNP residues 36-296 3988 3.2.2.22 | Details
34 5U4L 1 A Ricin residues 36-302 3988 3.2.2.22 | Details
35 2AAI 1 A RICIN (A CHAIN) 3988 3.2.2.22 | Details
36 4LGS 1 A Ricin UNP residues 39-301 3988 3.2.2.22 | Details
37 2R2X 1 A Ricin A chain 3988 3.2.2.22 | Details
38 1IL4 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
39 1IL3 1 A RICIN A CHAIN 3988 3.2.2.22 | Details
40 3RTI 1 A Ricin Ricin A chain 3988 3.2.2.22 | Details
41 3RTJ 2 A Ricin A chain 3988 3.2.2.22 | Details
42 1IL5 1 A, B RICIN A CHAIN 3988 3.2.2.22 | Details
43 4KUC 1 A, I Ricin 3988 3.2.2.22 | Details
44 5BOZ 1 A, B, C, D, E, F Ricin UNP residues 39-298 3988 3.2.2.22 | Details
45 1IL9 1 A RICIN A CHAIN 3988 3.2.2.22 | Details