Sequence Similarity Clusters for the Entities in PDB 2A74

Entity #1 | Chains: A,D
Complement Component C3c protein, length: 643 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 8305
95 % 3 25 1302 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.1
PDBFlex
90 % 3 25 1324
70 % 3 25 1347
50 % 4 28 1288
40 % 4 28 1266
30 % 4 28 1262
Entity #2 | Chains: B,E
Complement Component C3c protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 5130
95 % 2 7 5448 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 7 5483
70 % 2 7 5367
50 % 2 7 5180
40 % 2 7 4862
30 % 2 7 4350
Entity #3 | Chains: C,F
Complement Component C3c protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 5204
95 % 2 7 5529 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.2
PDBFlex
90 % 2 7 5563
70 % 2 7 5449
50 % 2 7 5191
40 % 2 7 4875
30 % 2 7 4358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures