Sequence Similarity Clusters for the Entities in PDB 2A74

Entity #1 | Chains: A,D
Complement Component C3c protein, length: 643 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 7056
95 % 3 25 1225 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.1
PDBFlex
90 % 3 25 1253
70 % 3 25 1286
50 % 3 25 1342
40 % 4 28 1232
30 % 4 28 1205
Entity #2 | Chains: B,E
Complement Component C3c protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 4461
95 % 2 7 5264 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 7 5282
70 % 2 7 5174
50 % 2 7 4948
40 % 2 7 4676
30 % 2 7 4272
Entity #3 | Chains: C,F
Complement Component C3c protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 4367
95 % 2 7 5170 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.2
PDBFlex
90 % 2 7 5193
70 % 2 7 5081
50 % 2 7 4862
40 % 2 7 4602
30 % 2 7 4214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures