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The crystal structure of human CD1d with and without alpha-Galactosylceramide
Sequence Clustering and Redundancy Reduction Results
1ZT4
Sequence Clusters for the Sequence Entities in PDB 1ZT4
Entity #1: Chains: A,C - T-cell surface glycoprotein CD1d protein, length: 281 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 8 3416
95% 6 10 2857
90% 8 12 2322
70% 51 61 421
50% 60 71 370
40% 60 71 388
30% 62 73 384
Entity #2: Chains: B,D - Beta-2-microglobulin protein, length: 100 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 410 440 2
95% 437 468 3
90% 445 476 3
70% 628 676 5
50% 638 689 5
40% 638 689 6
30% 638 689 11
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.