Sequence Similarity Clusters for the Entities in PDB 1ZT4

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3642
95 % 9 13 3311 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 11 15 2871
70 % 63 75 522
50 % 83 97 430
40 % 83 97 452
30 % 835 899 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 579 618 2
95 % 622 662 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 631 671 4
70 % 854 916 4
50 % 871 938 3
40 % 871 938 7
30 % 871 938 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures