Sequence Similarity Clusters for the Entities in PDB 1ZT4

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3768
95 % 9 13 3421 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 11 15 2955
70 % 68 80 456
50 % 90 104 402
40 % 90 104 424
30 % 854 919 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 592 632 2
95 % 635 676 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 644 685 4
70 % 873 936 4
50 % 890 958 3
40 % 890 958 7
30 % 890 958 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures