Sequence Similarity Clusters for the Entities in PDB 1ZT4

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3533
95 % 9 13 3211 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 11 15 2781
70 % 61 73 488
50 % 77 91 429
40 % 77 91 458
30 % 799 859 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 561 596 2
95 % 603 639 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 612 648 4
70 % 821 878 4
50 % 838 900 3
40 % 838 900 8
30 % 838 900 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.