Sequence Similarity Clusters for the Entities in PDB 1ZT4

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3571
95 % 9 13 3254 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 11 15 2816
70 % 63 75 474
50 % 79 93 430
40 % 79 93 461
30 % 818 881 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 569 607 2
95 % 612 651 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 621 660 4
70 % 838 898 4
50 % 855 920 3
40 % 855 920 8
30 % 855 920 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.