Sequence Similarity Clusters for the Entities in PDB 1ZT4

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1d protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 3715
95 % 9 13 3383 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 11 15 2916
70 % 65 77 481
50 % 85 99 418
40 % 85 99 445
30 % 844 909 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 584 624 2
95 % 627 668 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 636 677 4
70 % 861 924 4
50 % 878 946 3
40 % 878 946 7
30 % 878 946 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures