Sequence Similarity Clusters for the Entities in PDB 1ZR4

Entity #1 | Chains: J,M,U,X
TCAGTGTCCGATAATTTAT dna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: I,O,W,Z
AAA dna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: K,N,V,Y
TTATCGGACACTG dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: A,B,D,E
Transposon gamma-delta resolvase protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13234
95 % 2 4 7146 Flexibility: Medium
Max RMSD: 7.4, Avg RMSD: 3.2
PDBFlex
90 % 2 4 7110
70 % 4 6 4133
50 % 4 6 3979
40 % 4 6 3806
30 % 5 9 2578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.