Sequence Similarity Clusters for the Entities in PDB 1ZMY

Entity #1 | Chains: A
Antibody cabbcII-10:lys3 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66917
95 % 1 1 46092
90 % 6 6 8039
70 % 318 397 9
50 % 455 594 7
40 % 720 948 5
30 % 801 1077 7
Entity #2 | Chains: L,M
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 623 666 3
95 % 675 719 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 690 736 5
70 % 905 956 7
50 % 912 964 8
40 % 945 998 11
30 % 945 998 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures