Sequence Similarity Clusters for the Entities in PDB 1ZMY

Entity #1 | Chains: A
Antibody cabbcII-10:lys3 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55450
95 % 1 1 45533
90 % 6 6 8374
70 % 329 409 9
50 % 463 609 6
40 % 4173 5750 1
30 % 5208 7168 1
Entity #2 | Chains: L,M
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 672 717 3
95 % 689 734 3 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 704 751 5
70 % 922 974 7
50 % 929 982 8
40 % 962 1016 10
30 % 962 1016 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures