Sequence Similarity Clusters for the Entities in PDB 1ZIM

Entity #1 | Chains: A,B,C
GENERAL CONTROL PROTEIN GCN4 protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16064
95 % 9 26 801 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 14 35 476
70 % 41 99 146
50 % 43 114 151
40 % 43 114 168
30 % 43 114 185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.