Sequence Similarity Clusters for the Entities in PDB 1ZHN

Entity #1 | Chains: A
CD1d1 antigen protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 57 557
95 % 38 63 620
90 % 40 65 594
70 % 49 80 461
50 % 68 104 402
40 % 68 104 430
30 % 780 930 12
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 146 189 68
95 % 178 234 62 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 178 234 66
70 % 801 944 4
50 % 815 966 3
40 % 815 966 6
30 % 815 966 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures