Sequence Similarity Clusters for the Entities in PDB 1ZHN

Entity #1 | Chains: A
CD1d1 antigen protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 54 533
95 % 37 60 644 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.8
PDBFlex
90 % 37 60 671
70 % 46 75 474
50 % 60 93 430
40 % 60 93 461
30 % 742 881 15
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 133 95
95 % 171 223 62 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 171 223 66
70 % 767 898 4
50 % 781 920 3
40 % 781 920 8
30 % 781 920 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.