Sequence Similarity Clusters for the Entities in PDB 1ZHN

Entity #1 | Chains: A
CD1d1 antigen protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 52 548
95 % 35 58 660 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.8
PDBFlex
90 % 35 58 684
70 % 44 73 487
50 % 58 91 431
40 % 58 91 459
30 % 722 856 15
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 133 95
95 % 163 215 64 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 163 215 68
70 % 749 875 4
50 % 763 897 4
40 % 763 897 9
30 % 763 897 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.