Sequence Similarity Clusters for the Entities in PDB 1ZD6

Entity #1 | Chains: A,B
Transthyretin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 176 225 24
95 % 234 298 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 234 298 12
70 % 235 304 17
50 % 244 315 29
40 % 244 315 40
30 % 249 327 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures