Sequence Similarity Clusters for the Entities in PDB 1ZAA

Entity #1 | Chains: A
DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
PROTEIN (ZIF268) protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 7514
95 % 11 16 3830 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 11 16 3877
70 % 11 18 3013
50 % 19 34 1450
40 % 22 181 264
30 % 23 203 236

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4X9J 1 A Early growth response protein 1 UNP residues 335-423 9606
2 5KL3 1 A Wilms tumor protein 9606
3 4R2A 1 A Early growth response protein 1 Zinc Finger 1-3 9606
4 4R2Q 1 A Wilms tumor protein, isoform 4/CRA_a Zinc Finger 2-4 9606
5 5KL7 1 A Wilms tumor protein UNP residues 333-420 9606
6 5KL6 1 A Wilms tumor protein 9606
7 1A1I 3 A RADR ZIF268 ZINC FINGER PEPTIDE 10090
8 1AAY 3 A PROTEIN (ZIF268 ZINC FINGER PEPTIDE) 10090
9 5KL2 1 A Wilms tumor protein UNP residues 333-420 9606
10 1A1H 3 A QGSR ZINC FINGER PEPTIDE 10090
11 2WBS 1 A KRUEPPEL-LIKE FACTOR 4 DNA-BINDING DOMAIN, RESIDUES 395-483 10090
12 4R2E 1 A Wilms tumor protein, isoform 4/CRA_a Zinc Finger 2-4 9606
13 4R2P 1 A Wilms tumor protein, isoform 4/CRA_a Zinc Finger 2-4 9606
14 1JK2 3 A ZIF268 ZINC FINGERS (Residues 333-421) 10090
15 4M9E 1 A Krueppel-like factor 4 UNP residues 396-483 10090
16 5KL4 1 A, D Wilms tumor protein UNP residues 333-420 9606
17 4R2C 1 A Early growth response protein 1 Zinc Finger 1-3 9606
18 1A1K 3 A RADR ZIF268 VARIANT ZINC FINGER 10090
19 1JK1 3 A ZIF268 ZINC FINGERS (Residues 333-421) 10090
20 1A1G 3 A DSNR ZINC FINGER PEPTIDE 10090
21 5KE6 1 A Krueppel-like factor 4 unp residues 396-483 10090
22 1ZAA 3 C PROTEIN (ZIF268) 10090
23 5KE7 1 A Krueppel-like factor 4 unp residues 396-483 10090
24 1A1J 3 A PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE) ZINC FINGER 10090
25 4R2R 1 A Wilms tumor protein, isoform 4/CRA_a Zinc Finger 2-4 9606
26 4R2D 1 A Early growth response protein 1 Zinc Finger 1-3 9606
27 1G2F 3 C, F TATA BOX ZINC FINGER PROTEIN 10090
28 1A1F 3 A THREE-FINGER ZIF268 PEPTIDE 10090
29 5KL5 1 A Wilms tumor protein UNP residues 333-420 9606
30 1A1L 3 A PROTEIN (ZIF268 ZINC FINGER PEPTIDE) ZINC FINGER 10090
31 1P47 3 A, B Early growth response protein 1 residues 333-419 10090
32 1MEY 3 C, F, G CONSENSUS ZINC FINGER
33 1G2D 3 C, F TATA BOX ZINC FINGER PROTEIN 10090
34 5KE9 1 A Krueppel-like factor 4 unp residues 396-483 10090
35 4R2S 1 A Wilms tumor protein, isoform 4/CRA_a Zinc Finger 2-4 9606
36 2WBU 1 A KRUEPPEL-LIKE FACTOR 4 RESIDUES 396-483 10090
37 5KE8 1 A Krueppel-like factor 4 unp residues 396-483 10090
38 5KEA 1 A Krueppel-like factor 4 unp residues 396-483 10090
39 5KEB 1 A Krueppel-like factor 4 unp residues 396-483 10090
40 2RUT 1 A Zinc finger protein ZFAT UNP residues 269-297 9606
41 2RUU 1 A Zinc finger protein ZFAT UNP residues 297-325 9606
42 2RV2 1 A Zinc finger protein ZFAT UNP residues 907-935 9606
43 2RV3 1 A Zinc finger protein ZFAT UNP residues 935-963 9606
44 2RV6 1 A Zinc finger protein ZFAT UNP residues 269-353 9606
45 2LVT 1 A Zinc finger and BTB domain-containing protein 17 C2H2-TYPE 8-10, ZINC FINGER RESIDUES 500-581 9606
46 2LVU 1 A Zinc finger and BTB domain-containing protein 17 C2H2-TYPE 8-10, ZINC FINGER RESIDUES 500-581 9606
47 2LVR 1 A Zinc finger and BTB domain-containing protein 17 C2H2-type 8 Zinc finger residues 500-581 9606
48 2RSJ 1 A Zinc finger protein ZFAT C2H2-type 3-5, UNP residues 269-353 9606
49 2KMK 1 A Zinc finger protein Gfi-1 UNP residues 312-393 10116
50 2YU8 1 A Zinc finger protein 347 zf-C2H2 9606
51 2YT9 1 A zinc finger-containing protein 1 C2H2 domain 9606
52 2YTA 1 A Zinc finger protein 32 Zinc-finger motif 9606
53 2YTB 1 A Zinc finger protein 32 zinc-finger motif 9606
54 2YTD 1 A Zinc finger protein 473 zf-C2H2 9606
55 2YTE 1 A Zinc finger protein 473 zf-C2H2 9606
56 2YTF 1 A Zinc finger protein 268 zf-C2H2, UNP residues 607-639 9606
57 2YTG 1 A Zinc finger protein 95 homolog zf-C2H2, UNP residues 369-401 9606
58 2YTH 1 A Zinc finger protein 224 zf-C2H2, UNP residues 479-511 9606
59 2YTI 1 A Zinc finger protein 347 zf-C2H2 domain 9606
60 2YTJ 1 A Zinc finger protein 484 zf-C2H2 domain 9606
61 2YTK 1 A Zinc finger protein 347 zf-C2H2 9606
62 2YTM 1 A Zinc finger protein 28 homolog zf-C2H2 9606
63 2YTN 1 A Zinc finger protein 347 zf-C2H2 9606
64 2YTO 1 A Zinc finger protein 484 zf-C2H2 9606
65 2YTP 1 A Zinc finger protein 484 zf-C2H2 9606
66 2YTQ 1 A Zinc finger protein 268 zf-C2H2 9606
67 2YTR 1 A Zinc finger protein 347 zf-C2H2 9606
68 2YTS 1 A Zinc finger protein 484 zf-C2H2 9606
69 2YTT 1 A Zinc finger protein 473 zf-C2H2 9606
70 2YU5 1 A Zinc finger protein 473 zf-C2H2 9606
71 2YSV 1 A Zinc finger protein 473 Zinc finger domain 9606
72 2YSO 1 A Zinc finger protein 95 homolog ZF-C2H2 9606
73 2YSP 1 A Zinc finger protein 224 ZF-C2H2 9606
74 2YRH 1 A Zinc finger protein 473 C2H2-type zinc finger 9606
75 2YRJ 1 A Zinc finger protein 473 C2H2-type zinc finger 9606
76 2YRM 1 A B-cell lymphoma 6 protein zf-C2H2 domain 9606
77 2EPQ 1 A POZ-, AT hook-, and zinc finger-containing protein 1 zinc finger domain 9606
78 2EPR 1 A POZ-, AT hook-, and zinc finger-containing protein 1 zinc finger domain, UNP residues 350-384 9606
79 2EPS 1 A POZ-, AT hook-, and zinc finger-containing protein 1 zinc finger domain, UNP residues 408-448 9606
80 2EPT 1 A Zinc finger protein 32 zinc finger domain 9606
81 2EPU 1 A Zinc finger protein 32 zinc finger domain 9606
82 2EPV 1 A Zinc finger protein 268 zinc finger domain 9606
83 2EPW 1 A Zinc finger protein 268 zinc finger domain, UNP residues 915-947 9606
84 2EPX 1 A Zinc finger protein 28 homolog zinc finger domain, UNP residues 471-504 9606
85 2EPY 1 A Zinc finger protein 268 zinc finger domain, UNP residues 525-553 9606
86 2EPZ 1 A Zinc finger protein 28 homolog zinc finger domain, UNP residues 500-532 9606
87 2EQ0 1 A Zinc finger protein 347 zinc finger domain 9606
88 2EQ1 1 A Zinc finger protein 347 zinc finger domain 9606
89 2EQ2 1 A Zinc finger protein 347 zinc finger domain 9606
90 2EQ3 1 A Zinc finger protein 347 zinc finger domain 9606
91 2EQ4 1 A Zinc finger protein 224 zinc finger domain 9606
92 2EQW 1 A Zinc finger protein 484 zinc finger domain 9606
93 2EOE 1 A Zinc finger protein 347 zf-C2H2, UNP residues 508-540 9606
94 2EOF 1 A Zinc finger protein 268 zf-C2H2 domain 9606
95 2EOG 1 A Zinc finger protein 268 zf-C2H2 domain 9606
96 2EOH 1 A Zinc finger protein 28 homolog zf-C2H2 domain 9606
97 2EOI 1 A Zinc finger protein 268 zf-C2H2 domain 9606
98 2EOJ 1 A Zinc finger protein 268 zf-C2H2 domain 9606
99 2EOK 1 A Zinc finger protein 268 zf-C2H2 domain 9606
100 2EOL 1 A Zinc finger protein 268 zf-C2H2 domain 9606
101 2EOM 1 A Zinc finger protein 95 homolog zf-C2H2 9606
102 2EON 1 A Zinc finger protein 95 homolog zf-C2H2 domain 9606
103 2EOO 1 A Zinc finger protein 95 homolog zf-C2H2 9606
104 2EOP 1 A Zinc finger protein 268 zf-C2H2, UNP residues 719-751 9606
105 2EOQ 1 A Zinc finger protein 224 zf-C2H2, UNP residues 283-315 9606
106 2EOR 1 A Zinc finger protein 224 zf-C2H2 domain 9606
107 2EOS 1 A B-cell lymphoma 6 protein zf-C2H2 domain 9606
108 2EOU 1 A Zinc finger protein 473 zf-C2H2 domain 9606
109 2EOV 1 A Zinc finger protein 484 zf-C2H2, UNP residues 519-551 9606
110 2EOW 1 A Zinc finger protein 347 zf-C2H2, UNP residues 368-400 9606
111 2EOX 1 A Zinc finger protein 473 zf-C2H2 domain 9606
112 2EOY 1 A Zinc finger protein 473 zf-C2H2 domain 9606
113 2EOZ 1 A Zinc finger protein 473 zf-C2H2 domain 9606
114 2EP0 1 A Zinc finger protein 28 homolog zf-C2H2 domain 9606
115 2EP1 1 A Zinc finger protein 484 zf-C2H2, UNP residues 435-467 9606
116 2EP2 1 A Zinc finger protein 484 zf-C2H2, UNP residues 603-635 9606
117 2EP3 1 A Zinc finger protein 484 zf-C2H2, UNP residues 631-663 9606
118 2EPA 1 A Krueppel-like factor 10 zf-C2H2, UNP residues 359-423 9606
119 2EPC 1 A Zinc finger protein 32 Zinc finger domain 9606
120 2ELY 1 A Zinc finger protein 224 zf-C2H2 domain 9606
121 2ELZ 1 A Zinc finger protein 224 zf-C2H2 domain 9606
122 2EM0 1 A Zinc finger protein 224 zf-C2H2 domain 9606
123 2EM1 1 A Zinc finger protein 268 zf-C2H2 domain 9606
124 2EM2 1 A Zinc finger protein 28 homolog zf-C2H2 9606
125 2EM3 1 A Zinc finger protein 28 homolog zf-C2H2 9606
126 2EM4 1 A Zinc finger protein 28 homolog zf-C2H2 domain 9606
127 2EM5 1 A Zinc finger protein 95 homolog zf-C2H2, UNP residues 768-800 9606
128 2EM6 1 A Zinc finger protein 224 f-C2H2, UNP residues 199-231 9606
129 2EM7 1 A Zinc finger protein 224 zf-C2H2 domain 9606
130 2EM8 1 A Zinc finger protein 224 zf-C2H2 9606
131 2EM9 1 A Zinc finger protein 224 zf-C2H2 9606
132 2EMA 1 A Zinc finger protein 347 zf-C2H2 domain 9606
133 2EMB 1 A Zinc finger protein 473 zf-C2H2 9606
134 2EMC 1 A Zinc finger protein 473 zf-C2H2 9606
135 2EME 1 A Zinc finger protein 473 zf-C2H2 domain 9606
136 2EMF 1 A Zinc finger protein 484 zf-C2H2 domain 9606
137 2EMG 1 A Zinc finger protein 484 zf-C2H2 9606
138 2EMH 1 A Zinc finger protein 484 zf-C2H2 9606
139 2EMI 1 A Zinc finger protein 484 zf-C2H2 domain 9606
140 2EMJ 1 A Zinc finger protein 28 homolog zf-C2H2 domain 9606
141 2EMK 1 A Zinc finger protein 28 homolog zf-C2H2, UNP residues 668-700 9606
142 2EML 1 A Zinc finger protein 28 homolog zf-C2H2, UNP residues 752-784 9606
143 2EMM 1 A Zinc finger protein 95 homolog zf-C2H2 domain 9606
144 2EMP 1 A Zinc finger protein 347 zf-C2H2 domain 9606
145 2EMV 1 A Zinc finger protein 268 zf-C2H2 domain 9606
146 2EMW 1 A Zinc finger protein 268 zf-C2H2 domain 9606
147 2EMX 1 A Zinc finger protein 268 zf-C2H2, UNP residues 273-303 9606
148 2EMY 1 A Zinc finger protein 268 zf-C2H2, UNP residues 551-583 9606
149 2EMZ 1 A Zinc finger protein 95 homolog zf-C2H2 9606
150 2EN0 1 A Zinc finger protein 268 zf-C2H2 9606
151 2EN1 1 A Zinc finger protein 224 zf-C2H2, UNP residues 563-595 9606
152 2EN2 1 A B-cell lymphoma 6 protein zf-C2H2, UNP residues 598-626 9606
153 2EN3 1 A Zinc finger protein 95 homolog zf-C2H2 9606
154 2EN4 1 A Zinc finger protein 347 zf-C2H2 9606
155 2EN6 1 A Zinc finger protein 268 zf-C2H2 9606
156 2EN7 1 A Zinc finger protein 268 zf-C2H2 9606
157 2EN8 1 A Zinc finger protein 224 zf-C2H2 domain 9606
158 2EN9 1 A Zinc finger protein 28 homolog zf-C2H2 9606
159 2ENA 1 A Zinc finger protein 224 zf-C2H2 9606
160 2ENC 1 A Zinc finger protein 224 zf-C2H2 domain 9606
161 2ENE 1 A Zinc finger protein 347 zf-C2H2 domain 9606
162 2ENF 1 A Zinc finger protein 347 zf-C2H2 9606
163 2ENH 1 A Zinc finger protein 28 homolog zf-C2H2 9606
164 2ENT 1 A Krueppel-like factor 15 zf-C2H2, UNP residues 346-380 9606
165 2ELQ 1 A Zinc finger protein 406 zf-C2H2 domain 9606
166 2ELR 1 A Zinc finger protein 406 zf-C2H2 domain 9606
167 2ELS 1 A Zinc finger protein 406 zf-C2H2 9606
168 2ELT 1 A Zinc finger protein 406 zf-C2H2 9606
169 2EL4 1 A Zinc finger protein 268 zf-C2H2 domain 9606
170 2EL5 1 A Zinc finger protein 268 zf-C2H2 domain 9606
171 2EL6 1 A Zinc finger protein 268 UNP Residues 831-863 9606
172 2EE8 1 A Protein odd-skipped-related 2 zf-C2H2 doamins 10090
173 2EBT 1 A Krueppel-like factor 5 zf-C2H2 9606
174 2DMD 1 A Zinc finger protein 64, isoforms 1 and 2 C2H2-type zinc-binding domain 9606
175 2CTU 1 A Zinc finger protein 483 Zinc finger domain 9606
176 2CT1 1 A Transcriptional repressor CTCF zinc finger domain 9606
177 2COT 1 A Zinc finger protein 435 ADK_lid domain 9606
178 1X5W 1 A Zinc finger protein 64, isoforms 1 C2H2 type zinc-binding domain 9606
179 1X6E 1 A Zinc finger protein 24 C2H2 type zinc finger domain 9606
180 1X6H 1 A Transcriptional repressor CTCF C2H2 type zinc finger domain 9606
181 1TF3 3 A TRANSCRIPTION FACTOR IIIA MINIMAL DNA BINDING, ZF1-3 CONTAINS THREE ZINC ATOMS, TETRAHEDRALLY COORDINATED BY TWO CYSTEINE AND TWO HISTIDINE SIDE CHAINS FINGERS 1-3 OF TFIIIA, RESIDUES 1, 11 - 101 8355