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An Information Portal to 108395 Biological Macromolecular Structures

Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
Sequence Clustering and Redundancy Reduction Results
1Z5L
Sequence Clusters for the Sequence Entities in PDB 1Z5L
Entity #1: Chains: A,C - T-cell surface glycoprotein CD1d antigen protein, length: 285 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 46 430
95% 19 50 576
90% 19 50 607
70% 19 63 427
50% 26 77 362
40% 26 77 386
30% 413 692 13
Entity #2: Chains: B,D - Beta-2-microglobulin protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 27 66 248
95% 95 192 25
90% 95 192 30
70% 435 720 5
50% 444 734 5
40% 444 734 8
30% 444 734 11
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.