POP-OUT | CLOSE
 
Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
Sequence Clustering and Redundancy Reduction Results
1Z5L
Sequence Clusters for the Sequence Entities in PDB 1Z5L
Entity #1: Chains: A,C - T-cell surface glycoprotein CD1d antigen protein, length: 285 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 46 411
95% 19 50 546
90% 19 50 573
70% 19 62 419
50% 24 72 372
40% 24 72 394
30% 26 74 389
Entity #2: Chains: B,D - Beta-2-microglobulin protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 27 66 239
95% 93 187 24
90% 93 187 28
70% 407 682 5
50% 416 696 5
40% 416 696 6
30% 416 696 11
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.