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An Information Portal to 107049 Biological Macromolecular Structures

Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
Sequence Clustering and Redundancy Reduction Results
1Z5L
Sequence Clusters for the Sequence Entities in PDB 1Z5L
Entity #1: Chains: A,C - T-cell surface glycoprotein CD1d antigen protein, length: 285 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 46 422
95% 19 50 559
90% 19 50 589
70% 19 63 421
50% 26 77 358
40% 26 77 380
30% 404 683 13
Entity #2: Chains: B,D - Beta-2-microglobulin protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 27 66 244
95% 95 192 24
90% 95 192 30
70% 426 711 5
50% 435 725 5
40% 435 725 7
30% 435 725 11
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.