Sequence Similarity Clusters for the Entities in PDB 1YYO

Entity #1 | Chains: C,D,E,F
5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3' rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Ribonuclease III protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25488
95 % 9 11 2463
90 % 9 11 2512
70 % 9 11 2493
50 % 9 11 2462
40 % 9 11 2447
30 % 12 14 1887

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.