Sequence Similarity Clusters for the Entities in PDB 1YXX

Entity #1 | Chains: A
Proto-oncogene serine/threonine-protein kinase Pim-1 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 103 330
95 % 65 146 266 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 65 146 277
70 % 65 146 329
50 % 65 148 387
40 % 65 148 415
30 % 1875 4566 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures