Sequence Similarity Clusters for the Entities in PDB 1YXX

Entity #1 | Chains: A
Proto-oncogene serine/threonine-protein kinase Pim-1 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 104 353
95 % 66 148 272 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 66 148 281
70 % 66 148 336
50 % 66 150 394
40 % 66 150 420
30 % 1935 4664 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures