Sequence Similarity Clusters for the Entities in PDB 1YXV

Entity #1 | Chains: A
Proto-oncogene serine/threonine-protein kinase Pim-1 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 109 247
95 % 31 145 253 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 31 145 269
70 % 31 145 308
50 % 31 147 352
40 % 31 147 370
30 % 1227 4076 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures