Sequence Similarity Clusters for the Entities in PDB 1YXU

Entity #1 | Chains: A,B,C,D
Proto-oncogene serine/threonine-protein kinase Pim-1 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 98 250
95 % 86 119 292 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 86 119 304
70 % 86 119 347
50 % 87 121 394
40 % 87 121 424
30 % 2296 3787 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.