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An Information Portal to 109093 Biological Macromolecular Structures

The crystal structure of the antibody Fab HyHEL5 complex with lysozyme at 1.7A resolution
Sequence Clustering and Redundancy Reduction Results
1YQV
Sequence Clusters for the Sequence Entities in PDB 1YQV
Entity #1: Chains: L - HyHEL-5 Antibody Light Chain protein, length: 211 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21882
95% 2 20 1378
90% 5 132 96
70% 86 1388 3
50% 212 3295 1
40% 212 3296 1
30% 230 3893 1
Entity #2: Chains: H - HyHEL-5 Antibody Heavy Chain protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48515
95% 1 3 18302
90% 1 12 2778
70% 104 1590 2
50% 213 3295 1
40% 213 3296 1
30% 231 3893 1
Entity #3: Chains: Y - Hen Egg White Lysozyme protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 219 525 3
95% 239 574 4
90% 245 591 5
70% 320 806 6
50% 320 815 6
40% 323 849 10
30% 323 849 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.