Sequence Similarity Clusters for the Entities in PDB 1YQV

Entity #1 | Chains: L
HyHEL-5 Antibody Light Chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24047
95 % 2 20 1516
90 % 5 135 135
70 % 104 1568 3
50 % 259 3813 1
40 % 259 3814 1
30 % 281 4537 1
Entity #2 | Chains: H
HyHEL-5 Antibody Heavy Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52919
95 % 1 3 20059
90 % 1 12 3088
70 % 127 1850 1
50 % 260 3813 1
40 % 260 3814 1
30 % 282 4537 1
Entity #3 | Chains: Y
Hen Egg White Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 239 571 3
95 % 263 624 4
90 % 269 641 5
70 % 344 856 6
50 % 344 865 6
40 % 347 899 10
30 % 347 899 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.