Sequence Similarity Clusters for the Entities in PDB 1YQV

Entity #1 | Chains: L
HyHEL-5 Antibody Light Chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24192
95 % 2 20 1526
90 % 5 136 134
70 % 107 1583 3
50 % 265 3846 1
40 % 265 3847 1
30 % 287 4574 1
Entity #2 | Chains: H
HyHEL-5 Antibody Heavy Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53239
95 % 1 3 20173
90 % 1 12 3112
70 % 130 1866 1
50 % 266 3846 1
40 % 266 3847 1
30 % 288 4574 1
Entity #3 | Chains: Y
Hen Egg White Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 240 574 3
95 % 264 627 4
90 % 270 644 5
70 % 345 859 6
50 % 345 868 6
40 % 348 902 10
30 % 348 902 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.