Sequence Similarity Clusters for the Entities in PDB 1YQV

Entity #1 | Chains: L
HyHEL-5 Antibody Light Chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25749
95 % 2 20 1645
90 % 5 141 137
70 % 116 1729 2
50 % 288 4220 1
40 % 288 4221 1
30 % 310 4972 1
Entity #2 | Chains: H
HyHEL-5 Antibody Heavy Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56328
95 % 1 3 21392
90 % 1 12 3358
70 % 140 2041 1
50 % 289 4220 1
40 % 289 4221 1
30 % 311 4972 1
Entity #3 | Chains: Y
Hen Egg White Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 273 618 3
95 % 297 671 4
90 % 303 688 5
70 % 378 904 6
50 % 378 912 6
40 % 381 946 10
30 % 381 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.