Sequence Similarity Clusters for the Entities in PDB 1YQV

Entity #1 | Chains: L
HyHEL-5 Antibody Light Chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24589
95 % 2 20 1545
90 % 5 137 137
70 % 109 1620 3
50 % 271 3940 1
40 % 271 3941 1
30 % 293 4669 1
Entity #2 | Chains: H
HyHEL-5 Antibody Heavy Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54015
95 % 1 3 20472
90 % 1 12 3165
70 % 133 1912 1
50 % 272 3940 1
40 % 272 3941 1
30 % 294 4669 1
Entity #3 | Chains: Y
Hen Egg White Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 244 580 3
95 % 268 633 4
90 % 274 650 5
70 % 349 865 6
50 % 349 874 6
40 % 352 908 10
30 % 352 908 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.